db Package
This is the module where all TVB Index DataTypes are hooked into the framework.
Define in __all__ attribute, modules to be introspected for finding their classes.
annotation
-
class tvb.adapters.datatypes.db.annotation.AnnotationTerm(id, parent, parent_left, parent_right, relation, label, definition=None, synonym=None, uri=None, tvb_left=None, tvb_right=None)[source]
Bases: builtins.object
One single annotation node (in the tree of annotations / region)
-
add_child(annotation_child)[source]
-
to_json(is_right_hemisphere=False, activation_patterns=None)[source]
-
to_tuple()[source]
-
class tvb.adapters.datatypes.db.annotation.ConnectivityAnnotationsIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
Ontology annotations for a Connectivity.
-
annotations_length
-
connectivity
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_connectivity_gid
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
connectivity
-
class tvb.adapters.datatypes.db.connectivity.ConnectivityIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
static accepted_filters()[source]
-
create_date
-
disk_size
-
display_name[source]
Overwrite from superclass and add number of regions field
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
gid
-
has_cortical_mask
-
has_hemispheres_mask
-
id
-
invalid
-
is_nan
-
module
-
number_of_connections
-
number_of_regions
-
parent_operation
-
state
-
subject
-
title
-
tract_lengths_max
-
tract_lengths_mean
-
tract_lengths_min
-
type
-
type_
-
undirected
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
weights_max
-
weights_mean
-
weights_min
fcd
-
class tvb.adapters.datatypes.db.fcd.FcdIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_ordering
-
module
-
ndim
-
parent_operation
-
shape
-
source
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
graph
-
class tvb.adapters.datatypes.db.graph.ConnectivityMeasureIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
connectivity
-
create_date
-
disk_size
-
display_name[source]
Overwrite from superclass and add number of regions field
-
fill_from_h5(h5_file)[source]
-
fill_from_has_traits(datatype)[source]
-
fk_connectivity_gid
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
gid
-
has_surface_mapping
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
module
-
ndim
-
parent_operation
-
shape
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.graph.CorrelationCoefficientsIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_ordering
-
module
-
ndim
-
parent_operation
-
shape
-
source
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.graph.CovarianceIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
module
-
ndim
-
parent_operation
-
shape
-
source
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
local_connectivity
-
class tvb.adapters.datatypes.db.local_connectivity.LocalConnectivityIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_surface_gid
-
gid
-
id
-
invalid
-
is_nan
-
matrix_non_zero_max
-
matrix_non_zero_mean
-
matrix_non_zero_min
-
module
-
parent_operation
-
state
-
subject
-
surface
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
mapped_value
-
class tvb.adapters.datatypes.db.mapped_value.DatatypeMeasureIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
Class to hold the metric for a previous stored DataType.
E.g. Measure (single value) for any TimeSeries resulted in a group of Simulations
-
create_date
-
disk_size
-
display_name[source]
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
gid
-
id
-
invalid
-
is_nan
-
metrics
-
module
-
parent_operation
-
source
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.mapped_value.ValueWrapperIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
Class to wrap a singular value storage in DB.
-
create_date
-
data_name
-
data_type
-
data_value
-
disk_size
-
display_name[source]
Simple String to be used for display in UI.
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
mode_decompositions
-
class tvb.adapters.datatypes.db.mode_decompositions.IndependentComponentsIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
array_has_complex
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
gid
-
id
-
invalid
-
is_nan
-
module
-
ndim
-
parent_operation
-
parsed_shape[source]
-
shape
-
source
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.mode_decompositions.PrincipalComponentsIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
source
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
patterns
-
class tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
spatial_equation
-
spatial_parameters
-
state
-
subject
-
temporal_equation
-
temporal_parameters
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.patterns.StimuliRegionIndex(gid=None, **kwargs)[source]
Bases: tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex
-
connectivity
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_connectivity_gid
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
spatial_equation
-
spatial_parameters
-
state
-
subject
-
temporal_equation
-
temporal_parameters
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.patterns.StimuliSurfaceIndex(gid=None, **kwargs)[source]
Bases: tvb.adapters.datatypes.db.patterns.SpatioTemporalPatternIndex
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_surface_gid
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
spatial_equation
-
spatial_parameters
-
state
-
subject
-
surface
-
temporal_equation
-
temporal_parameters
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
projections
-
class tvb.adapters.datatypes.db.projections.ProjectionMatrixIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
brain_skull
-
create_date
-
disk_size
-
display_name[source]
Overwrite from superclass and add subtype
-
fill_from_has_traits(datatype)[source]
-
fk_brain_skull_gid
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_sensors_gid
-
fk_skin_air_gid
-
fk_skull_skin_gid
-
fk_source_gid
-
get_subtype_attr()[source]
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
projection_type
-
sensors
-
skin_air
-
skull_skin
-
source
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
region_mapping
-
class tvb.adapters.datatypes.db.region_mapping.RegionMappingIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
after_store()[source]
In case associated ConnectivityMeasureIndex entities already exist in the system and
they are compatible with the current RegionMappingIndex, change their flag has_surface_mapping True
-
array_data_max
-
array_data_mean
-
array_data_min
-
connectivity
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_connectivity_gid
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_surface_gid
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
state
-
subject
-
surface
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.region_mapping.RegionVolumeMappingIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
after_store()[source]
In case associated ConnectivityMeasureIndex entities already exist in the system and
they are compatible with the current RegionVolumeMappingIndex, change their flag has_volume_mapping True
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
connectivity
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_connectivity_gid
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_volume_gid
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
module
-
ndim
-
parent_operation
-
shape
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
volume
sensors
-
class tvb.adapters.datatypes.db.sensors.SensorsIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
create_date
-
disk_size
-
display_name[source]
Overwrite from superclass and add number of sensors and subtype
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
get_subtype_attr()[source]
-
gid
-
id
-
invalid
-
is_nan
-
module
-
number_of_sensors
-
parent_operation
-
sensors_type
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
simulation_history
-
class tvb.adapters.datatypes.db.simulation_history.SimulationHistoryIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
spectral
-
class tvb.adapters.datatypes.db.spectral.CoherenceSpectrumIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
frequencies_max
-
frequencies_min
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
module
-
ndim
-
nfft
-
parent_operation
-
shape
-
source
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.spectral.ComplexCoherenceSpectrumIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
create_date
-
disk_size
-
epoch_length
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
frequency_step
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
max_frequency
-
module
-
ndim
-
parent_operation
-
segment_length
-
shape
-
source
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
windowing_function
-
class tvb.adapters.datatypes.db.spectral.FourierSpectrumIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
frequency_step
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
max_frequency
-
module
-
ndim
-
parent_operation
-
segment_length
-
shape
-
source
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
windowing_function
-
class tvb.adapters.datatypes.db.spectral.WaveletCoefficientsIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
frequencies_max
-
frequencies_min
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
module
-
mother
-
ndim
-
normalisation
-
number_of_scales
-
parent_operation
-
q_ratio
-
sample_period
-
shape
-
source
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
structural
-
class tvb.adapters.datatypes.db.structural.StructuralMRIIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_volume_gid
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
module
-
ndim
-
parent_operation
-
shape
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
volume
-
weighting
surface
-
class tvb.adapters.datatypes.db.surface.SurfaceIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
bi_hemispheric
-
create_date
-
disk_size
-
display_name[source]
Overwrite from superclass and subtype
-
edge_max_length
-
edge_mean_length
-
edge_min_length
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
get_subtype_attr()[source]
-
gid
-
id
-
invalid
-
is_nan
-
module
-
number_of_edges
-
number_of_triangles
-
number_of_vertices
-
parent_operation
-
state
-
subject
-
surface_type
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
valid_for_simulations
-
visible
temporal_correlations
-
class tvb.adapters.datatypes.db.temporal_correlations.CrossCorrelationIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataTypeMatrix
-
array_data_max
-
array_data_mean
-
array_data_min
-
array_has_complex
-
array_is_finite
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_source_gid
-
gid
-
has_valid_time_series
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_ordering
-
module
-
ndim
-
parent_operation
-
shape
-
source
-
state
-
subject
-
subtype
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
time_series
-
class tvb.adapters.datatypes.db.time_series.TimeSeriesEEGIndex(gid=None, **kwargs)[source]
Bases: tvb.adapters.datatypes.db.time_series.TimeSeriesIndex
-
create_date
-
data_length_1d
-
data_length_2d
-
data_length_3d
-
data_length_4d
-
data_ndim
-
disk_size
-
fill_from_h5(h5_file)[source]
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_sensors_gid
-
gid
-
has_surface_mapping
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_dimensions
-
labels_ordering
-
module
-
parent_operation
-
sample_period
-
sample_period_unit
-
sample_rate
-
sensors
-
start_time
-
state
-
subject
-
time_series_type
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.time_series.TimeSeriesIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
static accepted_filters()[source]
-
create_date
-
data_length_1d
-
data_length_2d
-
data_length_3d
-
data_length_4d
-
data_ndim
-
disk_size
-
fill_from_h5(h5_file)[source]
-
fill_from_has_traits(datatype)[source]
-
fill_shape(final_shape)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
get_data_shape()[source]
-
get_labels_for_dimension(idx)[source]
-
gid
-
has_surface_mapping
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_dimensions
-
labels_ordering
-
module
-
parent_operation
-
sample_period
-
sample_period_unit
-
sample_rate
-
start_time
-
state
-
subject
-
time_series_type
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.time_series.TimeSeriesMEGIndex(gid=None, **kwargs)[source]
Bases: tvb.adapters.datatypes.db.time_series.TimeSeriesIndex
-
create_date
-
data_length_1d
-
data_length_2d
-
data_length_3d
-
data_length_4d
-
data_ndim
-
disk_size
-
fill_from_h5(h5_file)[source]
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_sensors_gid
-
gid
-
has_surface_mapping
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_dimensions
-
labels_ordering
-
module
-
parent_operation
-
sample_period
-
sample_period_unit
-
sample_rate
-
sensors
-
start_time
-
state
-
subject
-
time_series_type
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.time_series.TimeSeriesRegionIndex(gid=None, **kwargs)[source]
Bases: tvb.adapters.datatypes.db.time_series.TimeSeriesIndex
-
connectivity
-
create_date
-
data_length_1d
-
data_length_2d
-
data_length_3d
-
data_length_4d
-
data_ndim
-
disk_size
-
fill_from_h5(h5_file)[source]
-
fill_from_has_traits(datatype)[source]
-
fk_connectivity_gid
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_region_mapping_gid
-
fk_region_mapping_volume_gid
-
gid
-
has_surface_mapping
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_dimensions
-
labels_ordering
-
module
-
parent_operation
-
region_mapping
-
region_mapping_volume
-
sample_period
-
sample_period_unit
-
sample_rate
-
start_time
-
state
-
subject
-
time_series_type
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.time_series.TimeSeriesSEEGIndex(gid=None, **kwargs)[source]
Bases: tvb.adapters.datatypes.db.time_series.TimeSeriesIndex
-
create_date
-
data_length_1d
-
data_length_2d
-
data_length_3d
-
data_length_4d
-
data_ndim
-
disk_size
-
fill_from_h5(h5_file)[source]
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_sensors_gid
-
gid
-
has_surface_mapping
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_dimensions
-
labels_ordering
-
module
-
parent_operation
-
sample_period
-
sample_period_unit
-
sample_rate
-
sensors
-
start_time
-
state
-
subject
-
time_series_type
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.time_series.TimeSeriesSurfaceIndex(gid=None, **kwargs)[source]
Bases: tvb.adapters.datatypes.db.time_series.TimeSeriesIndex
-
create_date
-
data_length_1d
-
data_length_2d
-
data_length_3d
-
data_length_4d
-
data_ndim
-
disk_size
-
fill_from_h5(h5_file)[source]
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_surface_gid
-
gid
-
has_surface_mapping
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_dimensions
-
labels_ordering
-
module
-
parent_operation
-
sample_period
-
sample_period_unit
-
sample_rate
-
start_time
-
state
-
subject
-
surface
-
time_series_type
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
class tvb.adapters.datatypes.db.time_series.TimeSeriesVolumeIndex(gid=None, **kwargs)[source]
Bases: tvb.adapters.datatypes.db.time_series.TimeSeriesIndex
-
create_date
-
data_length_1d
-
data_length_2d
-
data_length_3d
-
data_length_4d
-
data_ndim
-
disk_size
-
fill_from_h5(h5_file)[source]
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_volume_gid
-
gid
-
has_surface_mapping
-
has_volume_mapping
-
id
-
invalid
-
is_nan
-
labels_dimensions
-
labels_ordering
-
module
-
parent_operation
-
sample_period
-
sample_period_unit
-
sample_rate
-
start_time
-
state
-
subject
-
time_series_type
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
volume
tracts
-
class tvb.adapters.datatypes.db.tracts.TractsIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
fk_region_volume_map_gid
-
gid
-
id
-
invalid
-
is_nan
-
module
-
parent_operation
-
region_volume_map
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
volume
-
class tvb.adapters.datatypes.db.volume.VolumeIndex(gid=None, **kwargs)[source]
Bases: tvb.core.entities.model.model_datatype.DataType
-
create_date
-
disk_size
-
fill_from_has_traits(datatype)[source]
-
fk_datatype_group
-
fk_from_operation
-
fk_parent_burst
-
gid
-
id
-
invalid
-
is_nan
-
module
-
origin
-
parent_operation
-
parsed_origin[source]
-
parsed_voxel_size[source]
-
state
-
subject
-
title
-
type
-
type_
-
user_tag_1
-
user_tag_2
-
user_tag_3
-
user_tag_4
-
user_tag_5
-
visible
-
voxel_size
-
voxel_unit
