Source code for tvb.core.code_versions.code_update_scripts.6728_update_code

# -*- coding: utf-8 -*-
#
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# TheVirtualBrain-Framework Package. This package holds all Data Management, and
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"""
Populate Surface fields after 1.2.2, in version 1.2.3.

.. moduleauthor:: Lia Domide <lia.domide@codemart.ro>
"""

from tvb.basic.logger.builder import get_logger
from tvb.core.entities.storage import dao
from tvb.core.entities import model
from tvb.datatypes.surfaces import Surface


LOGGER = get_logger(__name__)



def update():
    """
    Update Surface metadata
    """

    try:
        all_surfaces = dao.get_generic_entity(model.DataType, "tvb.datatypes.surfaces", "module")
        for srf in all_surfaces:
            surface = dao.get_datatype_by_gid(srf.gid)
            if isinstance(surface, Surface):
                surface.configure()
                dao.store_entity(surface)
                surface.persist_full_metadata()
    except Exception:
        LOGGER.exception("Could update Surface entities!")