Source code for tvb.adapters.datatypes.h5.temporal_correlations_h5
# -*- coding: utf-8 -*-
#
#
# TheVirtualBrain-Framework Package. This package holds all Data Management, and
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# documentation-folder for more details. See also http://www.thevirtualbrain.org
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# (c) 2012-2024, Baycrest Centre for Geriatric Care ("Baycrest") and others
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# This program is free software: you can redistribute it and/or modify it under the
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from tvb.adapters.datatypes.h5.spectral_h5 import DataTypeMatrixH5
from tvb.core.neotraits.h5 import DataSet, Reference, Json
from tvb.datatypes.temporal_correlations import CrossCorrelation
[docs]
class CrossCorrelationH5(DataTypeMatrixH5):
def __init__(self, path):
super(CrossCorrelationH5, self).__init__(path)
self.array_data = DataSet(CrossCorrelation.array_data, self, expand_dimension=3)
self.source = Reference(CrossCorrelation.source, self)
self.time = DataSet(CrossCorrelation.time, self)
self.labels_ordering = Json(CrossCorrelation.labels_ordering, self)
[docs]
def read_data_shape(self):
"""
The shape of the data
"""
return self.array_data.shape
[docs]
def read_data_slice(self, data_slice):
"""
Expose chunked-data access.
"""
return self.array_data[data_slice]
[docs]
def write_data_slice(self, partial_result):
"""
Append chunk.
"""
self.array_data.append(partial_result.array_data, close_file=False)