TheVirtualBrain:
TheDocumentationwebsite.
# -*- coding: utf-8 -*-
#
#
# TheVirtualBrain-Framework Package. This package holds all Data Management, and
# Web-UI helpful to run brain-simulations. To use it, you also need do download
# TheVirtualBrain-Scientific Package (for simulators). See content of the
# documentation-folder for more details. See also http://www.thevirtualbrain.org
#
# (c) 2012-2022, Baycrest Centre for Geriatric Care ("Baycrest") and others
#
# This program is free software: you can redistribute it and/or modify it under the
# terms of the GNU General Public License as published by the Free Software Foundation,
# either version 3 of the License, or (at your option) any later version.
# This program is distributed in the hope that it will be useful, but WITHOUT ANY
# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
# PARTICULAR PURPOSE. See the GNU General Public License for more details.
# You should have received a copy of the GNU General Public License along with this
# program. If not, see <http://www.gnu.org/licenses/>.
#
#
# CITATION:
# When using The Virtual Brain for scientific publications, please cite it as follows:
#
# Paula Sanz Leon, Stuart A. Knock, M. Marmaduke Woodman, Lia Domide,
# Jochen Mersmann, Anthony R. McIntosh, Viktor Jirsa (2013)
# The Virtual Brain: a simulator of primate brain network dynamics.
# Frontiers in Neuroinformatics (7:10. doi: 10.3389/fninf.2013.00010)
#
#
from tvb.adapters.simulator.form_with_ranges import FormWithRanges
from tvb.core.neotraits.forms import Form, ArrayField, MultiSelectField
from tvb.simulator.models import ModelsEnum
[docs]def get_model_to_form_dict():
model_class_to_form = {
ModelsEnum.GENERIC_2D_OSCILLATOR.get_class(): Generic2dOscillatorModelForm,
ModelsEnum.KURAMOTO.get_class(): KuramotoModelForm,
ModelsEnum.SUP_HOPF.get_class(): SupHopfModelForm,
ModelsEnum.HOPFIELD.get_class(): HopfieldModelForm,
ModelsEnum.EPILEPTOR.get_class(): EpileptorModelForm,
ModelsEnum.EPILEPTOR_2D.get_class(): Epileptor2DModelForm,
ModelsEnum.EPILEPTOR_CODIM_3.get_class(): EpileptorCodim3ModelForm,
ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class(): EpileptorCodim3SlowModModelForm,
ModelsEnum.EPILEPTOR_RS.get_class(): EpileptorRestingStateModelForm,
ModelsEnum.JANSEN_RIT.get_class(): JansenRitModelForm,
ModelsEnum.ZETTERBERG_JANSEN.get_class(): ZetterbergJansenModelForm,
ModelsEnum.REDUCED_WONG_WANG.get_class(): ReducedWongWangModelForm,
ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class(): ReducedWongWangExcInhModelForm,
ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class(): ReducedSetFitzHughNagumoModelForm,
ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class(): ReducedSetHindmarshRoseModelForm,
ModelsEnum.ZERLAUT_FIRST_ORDER.get_class(): ZerlautAdaptationFirstOrderModelForm,
ModelsEnum.ZERLAUT_SECOND_ORDER.get_class(): ZerlautAdaptationSecondOrderModelForm,
ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class(): MontbrioPazoRoxinModelForm,
ModelsEnum.COOMBES_BYRNE.get_class(): CoombesByrneModelForm,
ModelsEnum.COOMBES_BYRNE_2D.get_class(): CoombesByrne2DModelForm,
ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class(): GastSchmidtKnoscheSDModelForm,
ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class(): GastSchmidtKnoscheSFModelForm,
ModelsEnum.DUMONT_GUTKIN.get_class(): DumontGutkinModelForm,
ModelsEnum.LINEAR.get_class(): LinearModelForm,
ModelsEnum.WILSON_COWAN.get_class(): WilsonCowanModelForm,
ModelsEnum.LARTER_BREAKSPEAR.get_class(): LarterBreakspearModelForm
}
return model_class_to_form
[docs]def get_ui_name_to_model():
ui_name_to_model = {
'Generic 2d Oscillator': ModelsEnum.GENERIC_2D_OSCILLATOR.get_class(),
'Kuramoto Oscillator': ModelsEnum.KURAMOTO.get_class(),
'supHopf': ModelsEnum.SUP_HOPF.get_class(),
'Hopfield': ModelsEnum.HOPFIELD.get_class(),
'Epileptor': ModelsEnum.EPILEPTOR.get_class(),
'Epileptor2D': ModelsEnum.EPILEPTOR_2D.get_class(),
'Epileptor codim 3': ModelsEnum.EPILEPTOR_CODIM_3.get_class(),
'Epileptor codim 3 ultra-slow modulations': ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class(),
'Epileptor Resting State': ModelsEnum.EPILEPTOR_RS.get_class(),
'Jansen-Rit': ModelsEnum.JANSEN_RIT.get_class(),
'Zetterberg-Jansen': ModelsEnum.ZETTERBERG_JANSEN.get_class(),
'Reduced Wong-Wang': ModelsEnum.REDUCED_WONG_WANG.get_class(),
'Reduced Wong-Wang with Excitatory and Inhibitory Coupled Populations': ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class(),
'Stefanescu-Jirsa 2D': ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class(),
'Stefanescu-Jirsa 3D': ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class(),
'Zerlaut adaptation first order': ModelsEnum.ZERLAUT_FIRST_ORDER.get_class(),
'Zerlaut adaptation second order': ModelsEnum.ZERLAUT_SECOND_ORDER.get_class(),
'Montbrio Pazo Roxin': ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class(),
'Coombes Byrne': ModelsEnum.COOMBES_BYRNE.get_class(),
'Coombes Byrne 2D': ModelsEnum.COOMBES_BYRNE_2D.get_class(),
'Gast Schmidt Knosche_SD': ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class(),
'Gast Schmidt Knosche_SF': ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class(),
'Dumont Gutkin': ModelsEnum.DUMONT_GUTKIN.get_class(),
'Linear model': ModelsEnum.LINEAR.get_class(),
'Wilson-Cowan': ModelsEnum.WILSON_COWAN.get_class(),
'Larter-Breakspear': ModelsEnum.LARTER_BREAKSPEAR.get_class()
}
return ui_name_to_model
[docs]class StateVariableRangesForm(Form):
def __init__(self):
super(StateVariableRangesForm, self).__init__()
[docs]class Generic2dOscillatorModelForm(FormWithRanges):
def __init__(self):
super(Generic2dOscillatorModelForm, self).__init__()
self.tau = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().tau)
self.I = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().I)
self.a = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().a)
self.b = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().b)
self.c = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().c)
self.d = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().d)
self.e = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().e)
self.f = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().f)
self.g = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().g)
self.alpha = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().alpha)
self.beta = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().beta)
self.gamma = ArrayField(ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().gamma)
self.variables_of_interest = MultiSelectField(
ModelsEnum.GENERIC_2D_OSCILLATOR.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['tau', 'a', 'b', 'c', 'I', 'd', 'e', 'f', 'g', 'alpha', 'beta', 'gamma']
[docs]class KuramotoModelForm(FormWithRanges):
def __init__(self):
super(KuramotoModelForm, self).__init__()
self.omega = ArrayField(ModelsEnum.KURAMOTO.get_class().omega)
self.variables_of_interest = MultiSelectField(ModelsEnum.KURAMOTO.get_class().variables_of_interest)
@staticmethod
[docs]class SupHopfModelForm(FormWithRanges):
def __init__(self):
super(SupHopfModelForm, self).__init__()
self.a = ArrayField(ModelsEnum.SUP_HOPF.get_class().a)
self.omega = ArrayField(ModelsEnum.SUP_HOPF.get_class().omega)
self.variables_of_interest = MultiSelectField(ModelsEnum.SUP_HOPF.get_class().variables_of_interest)
@staticmethod
[docs]class HopfieldModelForm(FormWithRanges):
def __init__(self):
super(HopfieldModelForm, self).__init__()
self.taux = ArrayField(ModelsEnum.HOPFIELD.get_class().taux)
self.tauT = ArrayField(ModelsEnum.HOPFIELD.get_class().tauT)
self.dynamic = ArrayField(ModelsEnum.HOPFIELD.get_class().dynamic)
self.variables_of_interest = MultiSelectField(ModelsEnum.HOPFIELD.get_class().variables_of_interest)
@staticmethod
[docs]class EpileptorModelForm(FormWithRanges):
def __init__(self):
super(EpileptorModelForm, self).__init__()
self.a = ArrayField(ModelsEnum.EPILEPTOR.get_class().a)
self.b = ArrayField(ModelsEnum.EPILEPTOR.get_class().b)
self.c = ArrayField(ModelsEnum.EPILEPTOR.get_class().c)
self.d = ArrayField(ModelsEnum.EPILEPTOR.get_class().d)
self.r = ArrayField(ModelsEnum.EPILEPTOR.get_class().r)
self.s = ArrayField(ModelsEnum.EPILEPTOR.get_class().s)
self.x0 = ArrayField(ModelsEnum.EPILEPTOR.get_class().x0)
self.Iext = ArrayField(ModelsEnum.EPILEPTOR.get_class().Iext)
self.slope = ArrayField(ModelsEnum.EPILEPTOR.get_class().slope)
self.Iext2 = ArrayField(ModelsEnum.EPILEPTOR.get_class().Iext2)
self.tau = ArrayField(ModelsEnum.EPILEPTOR.get_class().tau)
self.aa = ArrayField(ModelsEnum.EPILEPTOR.get_class().aa)
self.bb = ArrayField(ModelsEnum.EPILEPTOR.get_class().bb)
self.Kvf = ArrayField(ModelsEnum.EPILEPTOR.get_class().Kvf)
self.Kf = ArrayField(ModelsEnum.EPILEPTOR.get_class().Kf)
self.Ks = ArrayField(ModelsEnum.EPILEPTOR.get_class().Ks)
self.tt = ArrayField(ModelsEnum.EPILEPTOR.get_class().tt)
self.modification = ArrayField(ModelsEnum.EPILEPTOR.get_class().modification)
self.variables_of_interest = MultiSelectField(ModelsEnum.EPILEPTOR.get_class().variables_of_interest)
@staticmethod
[docs]class Epileptor2DModelForm(FormWithRanges):
def __init__(self):
super(Epileptor2DModelForm, self).__init__()
self.a = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().a)
self.b = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().b)
self.c = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().c)
self.d = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().d)
self.r = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().r)
self.x0 = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().x0)
self.Iext = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().Iext)
self.slope = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().slope)
self.Kvf = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().Kvf)
self.Ks = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().Ks)
self.tt = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().tt)
self.modification = ArrayField(ModelsEnum.EPILEPTOR_2D.get_class().modification)
self.variables_of_interest = MultiSelectField(ModelsEnum.EPILEPTOR_2D.get_class().variables_of_interest)
@staticmethod
[docs]class EpileptorCodim3ModelForm(FormWithRanges):
def __init__(self):
super(EpileptorCodim3ModelForm, self).__init__()
self.mu1_start = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().mu1_start)
self.mu2_start = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().mu2_start)
self.nu_start = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().nu_start)
self.mu1_stop = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().mu1_stop)
self.mu2_stop = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().mu2_stop)
self.nu_stop = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().nu_stop)
self.b = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().b)
self.R = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().R)
self.c = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().c)
self.dstar = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().dstar)
self.Ks = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().Ks)
self.N = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().N)
self.modification = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().modification)
self.variables_of_interest = MultiSelectField(ModelsEnum.EPILEPTOR_CODIM_3.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['mu1_start', 'mu2_start', 'nu_start', 'mu1_stop', 'mu2_stop', 'nu_stop', 'b', 'R', 'c', 'dstar', 'N',
'Ks']
[docs]class EpileptorCodim3SlowModModelForm(FormWithRanges):
def __init__(self):
super(EpileptorCodim3SlowModModelForm, self).__init__()
self.mu1_Ain = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().mu1_Ain)
self.mu2_Ain = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().mu2_Ain)
self.nu_Ain = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().nu_Ain)
self.mu1_Bin = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().mu1_Bin)
self.mu2_Bin = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().mu2_Bin)
self.nu_Bin = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().nu_Bin)
self.mu1_Aend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().mu1_Aend)
self.mu2_Aend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().mu2_Aend)
self.nu_Aend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().nu_Aend)
self.mu1_Bend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().mu1_Bend)
self.mu2_Bend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().mu2_Bend)
self.nu_Bend = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().nu_Bend)
self.b = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().b)
self.R = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().R)
self.c = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().c)
self.cA = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().cA)
self.cB = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().cB)
self.dstar = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().dstar)
self.Ks = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().Ks)
self.N = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().N)
self.modification = ArrayField(ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().modification)
self.variables_of_interest = MultiSelectField(
ModelsEnum.EPILEPTOR_CODIM_3_SLOW.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['mu1_Ain', 'mu2_Ain', 'nu_Ain', 'mu1_Bin', 'mu2_Bin', 'nu_Bin', 'mu1_Aend', 'mu2_Aend', 'nu_Aend',
'mu1_Bend', 'mu2_Bend', 'nu_Bend', 'b', 'R', 'c', 'dstar', 'N']
[docs]class EpileptorRestingStateModelForm(FormWithRanges):
def __init__(self):
super(EpileptorRestingStateModelForm, self).__init__()
self.a = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().a)
self.b = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().b)
self.c = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().c)
self.d = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().d)
self.r = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().r)
self.s = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().s)
self.x0 = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().x0)
self.Iext = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().Iext)
self.slope = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().slope)
self.Iext2 = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().Iext2)
self.tau = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().tau)
self.aa = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().aa)
self.bb = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().bb)
self.Kvf = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().Kvf)
self.Kf = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().Kf)
self.Ks = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().Ks)
self.tt = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().tt)
self.tau_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().tau_rs)
self.I_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().I_rs)
self.a_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().a_rs)
self.b_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().b_rs)
self.d_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().d_rs)
self.e_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().e_rs)
self.f_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().f_rs)
self.alpha_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().alpha_rs)
self.beta_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().beta_rs)
self.K_rs = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().K_rs)
self.p = ArrayField(ModelsEnum.EPILEPTOR_RS.get_class().p)
self.variables_of_interest = MultiSelectField(ModelsEnum.EPILEPTOR_RS.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['Iext', 'Iext2', 'r', 'x0', 'slope', 'tau_rs', 'a_rs', 'b_rs', 'I_rs', 'd_rs', 'e_rs', 'f_rs',
'alpha_rs', 'beta_rs', 'gamma_rs']
[docs]class JansenRitModelForm(FormWithRanges):
def __init__(self):
super(JansenRitModelForm, self).__init__()
self.A = ArrayField(ModelsEnum.JANSEN_RIT.get_class().A)
self.B = ArrayField(ModelsEnum.JANSEN_RIT.get_class().B)
self.a = ArrayField(ModelsEnum.JANSEN_RIT.get_class().a)
self.b = ArrayField(ModelsEnum.JANSEN_RIT.get_class().b)
self.v0 = ArrayField(ModelsEnum.JANSEN_RIT.get_class().v0)
self.nu_max = ArrayField(ModelsEnum.JANSEN_RIT.get_class().nu_max)
self.r = ArrayField(ModelsEnum.JANSEN_RIT.get_class().r)
self.J = ArrayField(ModelsEnum.JANSEN_RIT.get_class().J)
self.a_1 = ArrayField(ModelsEnum.JANSEN_RIT.get_class().a_1)
self.a_2 = ArrayField(ModelsEnum.JANSEN_RIT.get_class().a_2)
self.a_3 = ArrayField(ModelsEnum.JANSEN_RIT.get_class().a_3)
self.a_4 = ArrayField(ModelsEnum.JANSEN_RIT.get_class().a_4)
self.p_min = ArrayField(ModelsEnum.JANSEN_RIT.get_class().p_min)
self.p_max = ArrayField(ModelsEnum.JANSEN_RIT.get_class().p_max)
self.mu = ArrayField(ModelsEnum.JANSEN_RIT.get_class().mu)
self.variables_of_interest = MultiSelectField(ModelsEnum.JANSEN_RIT.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['A', 'B', 'a', 'b', 'v0', 'nu_max', 'r', 'J', 'a_1', 'a_2', 'a_3', 'a_4', 'p_min', 'p_max', 'mu']
[docs]class ZetterbergJansenModelForm(FormWithRanges):
def __init__(self):
super(ZetterbergJansenModelForm, self).__init__()
self.He = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().He)
self.Hi = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().Hi)
self.ke = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().ke)
self.ki = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().ki)
self.e0 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().e0)
self.rho_2 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().rho_2)
self.rho_1 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().rho_1)
self.gamma_1 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().gamma_1)
self.gamma_2 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().gamma_2)
self.gamma_3 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().gamma_3)
self.gamma_4 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().gamma_4)
self.gamma_5 = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().gamma_5)
self.gamma_1T = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().gamma_1T)
self.gamma_2T = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().gamma_2T)
self.gamma_3T = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().gamma_3T)
self.P = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().P)
self.U = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().U)
self.Q = ArrayField(ModelsEnum.ZETTERBERG_JANSEN.get_class().Q)
self.variables_of_interest = MultiSelectField(ModelsEnum.ZETTERBERG_JANSEN.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['He', 'Hi', 'ke', 'ki', 'e0', 'rho_2', 'rho_1', 'gamma_1', 'gamma_2', 'gamma_3', 'gamma_4', 'gamma_5',
'P', 'U', 'Q']
[docs]class ReducedWongWangModelForm(FormWithRanges):
def __init__(self):
super(ReducedWongWangModelForm, self).__init__()
self.a = ArrayField(ModelsEnum.REDUCED_WONG_WANG.get_class().a)
self.b = ArrayField(ModelsEnum.REDUCED_WONG_WANG.get_class().b)
self.d = ArrayField(ModelsEnum.REDUCED_WONG_WANG.get_class().d)
self.gamma = ArrayField(ModelsEnum.REDUCED_WONG_WANG.get_class().gamma)
self.tau_s = ArrayField(ModelsEnum.REDUCED_WONG_WANG.get_class().tau_s)
self.w = ArrayField(ModelsEnum.REDUCED_WONG_WANG.get_class().w)
self.J_N = ArrayField(ModelsEnum.REDUCED_WONG_WANG.get_class().J_N)
self.I_o = ArrayField(ModelsEnum.REDUCED_WONG_WANG.get_class().I_o)
self.sigma_noise = ArrayField(ModelsEnum.REDUCED_WONG_WANG.get_class().sigma_noise)
self.variables_of_interest = MultiSelectField(ModelsEnum.REDUCED_WONG_WANG.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['a', 'b', 'd', 'gamma', 'tau_s', 'w', 'J_N', 'I_o']
[docs]class ReducedWongWangExcInhModelForm(FormWithRanges):
def __init__(self):
super(ReducedWongWangExcInhModelForm, self).__init__()
self.a_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().a_e)
self.b_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().b_e)
self.d_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().d_e)
self.gamma_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().gamma_e)
self.tau_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().tau_e)
self.w_p = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().w_p)
self.J_N = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().J_N)
self.W_e = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().W_e)
self.a_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().a_i)
self.b_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().b_i)
self.d_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().d_i)
self.gamma_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().gamma_i)
self.tau_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().tau_i)
self.J_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().J_i)
self.W_i = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().W_i)
self.I_o = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().I_o)
self.G = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().G)
self.lamda = ArrayField(ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().lamda)
self.variables_of_interest = MultiSelectField(
ModelsEnum.REDUCED_WONG_WANG_EXCH_INH.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['a_e', 'b_e', 'd_e', 'gamma_e', 'tau_e', 'W_e', 'w_p', 'J_N', 'a_i', 'b_i', 'd_i', 'gamma_i', 'tau_i',
'W_i', 'J_i', 'I_o', 'G', 'lamda']
[docs]class ReducedSetFitzHughNagumoModelForm(FormWithRanges):
def __init__(self):
super(ReducedSetFitzHughNagumoModelForm, self).__init__()
self.tau = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class().tau)
self.a = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class().a)
self.b = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class().b)
self.K11 = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class().K11)
self.K12 = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class().K12)
self.K21 = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class().K21)
self.sigma = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class().sigma)
self.mu = ArrayField(ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class().mu)
self.variables_of_interest = MultiSelectField(
ModelsEnum.REDUCED_SET_FITZ_HUGH_NAGUMO.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['tau', 'a', 'b', 'K11', 'K12', 'K21', 'sigma', 'mu']
[docs]class ReducedSetHindmarshRoseModelForm(FormWithRanges):
def __init__(self):
super(ReducedSetHindmarshRoseModelForm, self).__init__()
self.r = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().r)
self.a = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().a)
self.b = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().b)
self.c = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().c)
self.d = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().d)
self.s = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().s)
self.xo = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().xo)
self.K11 = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().K11)
self.K12 = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().K12)
self.K21 = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().K21)
self.sigma = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().sigma)
self.mu = ArrayField(ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().mu)
self.variables_of_interest = MultiSelectField(
ModelsEnum.REDUCED_SET_HINDMARSH_ROSE.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['r', 'a', 'b', 'c', 'd', 's', 'xo', 'K11', 'K12', 'K21', 'sigma', 'mu']
[docs]class ZerlautAdaptationFirstOrderModelForm(FormWithRanges):
def __init__(self):
super(ZerlautAdaptationFirstOrderModelForm, self).__init__()
self.g_L = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().g_L)
self.E_L_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().E_L_e)
self.E_L_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().E_L_i)
self.C_m = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().C_m)
self.b_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().b_e)
self.b_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().b_i)
self.a_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().a_e)
self.a_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().a_i)
self.tau_w_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().tau_w_e)
self.tau_w_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().tau_w_i)
self.E_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().E_e)
self.E_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().E_i)
self.Q_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().Q_e)
self.Q_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().Q_i)
self.tau_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().tau_e)
self.tau_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().tau_i)
self.N_tot = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().N_tot)
self.p_connect = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().p_connect)
self.g = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().g)
self.K_ext_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().K_ext_e)
self.K_ext_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().K_ext_i)
self.T = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().T)
self.P_e = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().P_e)
self.P_i = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().P_i)
self.external_input_ex_ex = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().external_input_ex_ex)
self.external_input_ex_in = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().external_input_ex_in)
self.external_input_in_ex = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().external_input_in_ex)
self.external_input_in_in = ArrayField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().external_input_in_in)
self.variables_of_interest = MultiSelectField(ModelsEnum.ZERLAUT_FIRST_ORDER.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['g_L', 'E_L_e', 'E_L_i', 'C_m', 'b_e', 'b_i', 'a_e', 'a_i', 'tau_w_e', 'tau_w_i', 'E_e', 'E_i', 'Q_e',
'Q_i', 'tau_e', 'tau_i', 'N_tot', 'p_connect', 'g', 'K_ext_e', 'K_ext_i', 'T', 'external_input_ex_ex',
'external_input_ex_in', 'external_input_in_ex', 'external_input_in_in']
[docs]class ZerlautAdaptationSecondOrderModelForm(ZerlautAdaptationFirstOrderModelForm):
def __init__(self):
super(ZerlautAdaptationSecondOrderModelForm, self).__init__()
self.variables_of_interest = MultiSelectField(ModelsEnum.ZERLAUT_SECOND_ORDER.get_class().variables_of_interest)
[docs]class MontbrioPazoRoxinModelForm(FormWithRanges):
def __init__(self):
super(MontbrioPazoRoxinModelForm, self).__init__()
self.tau = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class().tau)
self.I = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class().I)
self.Delta = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class().Delta)
self.J = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class().J)
self.eta = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class().eta)
self.Gamma = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class().Gamma)
self.cr = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class().cr)
self.cv = ArrayField(ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class().cv)
self.variables_of_interest = MultiSelectField(ModelsEnum.MONTBRIO_PAZO_ROXIN.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['tau', 'I', 'Delta', 'J', 'eta', 'Gamma', 'cr', 'cv']
[docs]class CoombesByrneModelForm(FormWithRanges):
def __init__(self):
super(CoombesByrneModelForm, self).__init__()
self.Delta = ArrayField(ModelsEnum.COOMBES_BYRNE.get_class().Delta)
self.alpha = ArrayField(ModelsEnum.COOMBES_BYRNE.get_class().alpha)
self.v_syn = ArrayField(ModelsEnum.COOMBES_BYRNE.get_class().v_syn)
self.k = ArrayField(ModelsEnum.COOMBES_BYRNE.get_class().k)
self.eta = ArrayField(ModelsEnum.COOMBES_BYRNE.get_class().eta)
self.variables_of_interest = MultiSelectField(ModelsEnum.COOMBES_BYRNE.get_class().variables_of_interest)
@staticmethod
[docs]class CoombesByrne2DModelForm(FormWithRanges):
def __init__(self):
super(CoombesByrne2DModelForm, self).__init__()
self.Delta = ArrayField(ModelsEnum.COOMBES_BYRNE_2D.get_class().Delta)
self.v_syn = ArrayField(ModelsEnum.COOMBES_BYRNE_2D.get_class().v_syn)
self.k = ArrayField(ModelsEnum.COOMBES_BYRNE_2D.get_class().k)
self.eta = ArrayField(ModelsEnum.COOMBES_BYRNE_2D.get_class().eta)
self.variables_of_interest = MultiSelectField(ModelsEnum.COOMBES_BYRNE_2D.get_class().variables_of_interest)
@staticmethod
[docs]class GastSchmidtKnoscheSDModelForm(FormWithRanges):
def __init__(self):
super(GastSchmidtKnoscheSDModelForm, self).__init__()
self.tau = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().tau)
self.tau_A = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().tau_A)
self.alpha = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().alpha)
self.I = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().I)
self.Delta = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().Delta)
self.J = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().J)
self.eta = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().eta)
self.cr = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().cr)
self.cv = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().cv)
self.variables_of_interest = MultiSelectField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SD.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['tau', 'tau_A', 'alpha', 'I', 'Delta', 'J', 'eta', 'cr', 'cv']
[docs]class GastSchmidtKnoscheSFModelForm(FormWithRanges):
def __init__(self):
super(GastSchmidtKnoscheSFModelForm, self).__init__()
self.tau = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().tau)
self.tau_A = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().tau_A)
self.alpha = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().alpha)
self.I = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().I)
self.Delta = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().Delta)
self.J = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().J)
self.eta = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().eta)
self.cr = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().cr)
self.cv = ArrayField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().cv)
self.variables_of_interest = MultiSelectField(ModelsEnum.GAST_SCHMIDT_KNOSCHE_SF.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['tau', 'tau_A', 'alpha', 'I', 'Delta', 'J', 'eta', 'cr', 'cv']
[docs]class DumontGutkinModelForm(FormWithRanges):
def __init__(self):
super(DumontGutkinModelForm, self).__init__()
self.I_e = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().I_e)
self.Delta_e = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().Delta_e)
self.eta_e = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().eta_e)
self.tau_e = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().tau_e)
self.I_i = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().I_i)
self.Delta_i = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().Delta_i)
self.eta_i = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().eta_i)
self.tau_i = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().tau_i)
self.tau_s = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().tau_s)
self.J_ee = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().J_ee)
self.J_ei = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().J_ei)
self.J_ie = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().J_ie)
self.J_ii = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().J_ii)
self.Gamma = ArrayField(ModelsEnum.DUMONT_GUTKIN.get_class().Gamma)
self.variables_of_interest = MultiSelectField(ModelsEnum.DUMONT_GUTKIN.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['I_e', 'Delta_e', 'eta_e', 'tau_e', 'I_i', 'Delta_i', 'eta_i', 'tau_i', 'tau_s',
'J_ee', 'J_ei', 'J_ie', 'J_ii', 'Gamma']
[docs]class LinearModelForm(FormWithRanges):
def __init__(self):
super(LinearModelForm, self).__init__()
self.gamma = ArrayField(ModelsEnum.LINEAR.get_class().gamma)
self.variables_of_interest = MultiSelectField(ModelsEnum.LINEAR.get_class().variables_of_interest)
@staticmethod
[docs]class WilsonCowanModelForm(FormWithRanges):
def __init__(self):
super(WilsonCowanModelForm, self).__init__()
self.c_ee = ArrayField(ModelsEnum.WILSON_COWAN.get_class().c_ee)
self.c_ie = ArrayField(ModelsEnum.WILSON_COWAN.get_class().c_ie)
self.c_ei = ArrayField(ModelsEnum.WILSON_COWAN.get_class().c_ei)
self.c_ii = ArrayField(ModelsEnum.WILSON_COWAN.get_class().c_ii)
self.tau_e = ArrayField(ModelsEnum.WILSON_COWAN.get_class().tau_e)
self.tau_i = ArrayField(ModelsEnum.WILSON_COWAN.get_class().tau_i)
self.a_e = ArrayField(ModelsEnum.WILSON_COWAN.get_class().a_e)
self.b_e = ArrayField(ModelsEnum.WILSON_COWAN.get_class().b_e)
self.c_e = ArrayField(ModelsEnum.WILSON_COWAN.get_class().c_e)
self.theta_e = ArrayField(ModelsEnum.WILSON_COWAN.get_class().theta_e)
self.a_i = ArrayField(ModelsEnum.WILSON_COWAN.get_class().a_i)
self.b_i = ArrayField(ModelsEnum.WILSON_COWAN.get_class().b_i)
self.theta_i = ArrayField(ModelsEnum.WILSON_COWAN.get_class().theta_i)
self.c_i = ArrayField(ModelsEnum.WILSON_COWAN.get_class().c_i)
self.r_e = ArrayField(ModelsEnum.WILSON_COWAN.get_class().r_e)
self.r_i = ArrayField(ModelsEnum.WILSON_COWAN.get_class().r_i)
self.k_e = ArrayField(ModelsEnum.WILSON_COWAN.get_class().k_e)
self.k_i = ArrayField(ModelsEnum.WILSON_COWAN.get_class().k_i)
self.P = ArrayField(ModelsEnum.WILSON_COWAN.get_class().P)
self.Q = ArrayField(ModelsEnum.WILSON_COWAN.get_class().Q)
self.alpha_e = ArrayField(ModelsEnum.WILSON_COWAN.get_class().alpha_e)
self.alpha_i = ArrayField(ModelsEnum.WILSON_COWAN.get_class().alpha_i)
self.variables_of_interest = MultiSelectField(ModelsEnum.WILSON_COWAN.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['c_ee', 'c_ei', 'c_ie', 'c_ii', 'tau_e', 'tau_i', 'a_e', 'b_e', 'c_e', 'a_i', 'b_i', 'c_i', 'r_e',
'r_i', 'k_e', 'k_i', 'P', 'Q', 'theta_e', 'theta_i', 'alpha_e', 'alpha_i']
[docs]class LarterBreakspearModelForm(FormWithRanges):
def __init__(self):
super(LarterBreakspearModelForm, self).__init__()
self.gCa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().gCa)
self.gK = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().gK)
self.gL = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().gL)
self.phi = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().phi)
self.gNa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().gNa)
self.TK = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().TK)
self.TCa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().TCa)
self.TNa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().TNa)
self.VCa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().VCa)
self.VK = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().VK)
self.VL = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().VL)
self.VNa = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().VNa)
self.d_K = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().d_K)
self.tau_K = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().tau_K)
self.d_Na = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().d_Na)
self.d_Ca = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().d_Ca)
self.aei = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().aei)
self.aie = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().aie)
self.b = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().b)
self.C = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().C)
self.ane = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().ane)
self.ani = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().ani)
self.aee = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().aee)
self.Iext = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().Iext)
self.rNMDA = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().rNMDA)
self.VT = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().VT)
self.d_V = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().d_V)
self.ZT = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().ZT)
self.d_Z = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().d_Z)
self.QV_max = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().QV_max)
self.QZ_max = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().QZ_max)
self.t_scale = ArrayField(ModelsEnum.LARTER_BREAKSPEAR.get_class().t_scale)
self.variables_of_interest = MultiSelectField(ModelsEnum.LARTER_BREAKSPEAR.get_class().variables_of_interest)
@staticmethod
[docs] def get_params_configurable_in_phase_plane():
return ['gCa', 'gK', 'gL', 'phi', 'gNa', 'TK', 'TCa', 'TNa', 'VCa', 'VK', 'VL', 'VNa', 'd_K', 'tau_K', 'd_Na',
'd_Ca', 'aei', 'aie', 'b', 'C', 'ane', 'ani', 'aee', 'Iext', 'rNMDA', 'VT', 'd_V', 'ZT', 'd_Z',
'QV_max', 'QZ_max', 't_scale']